BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C11LP1|AL426012
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1621 0.0
>3x_Contig1800
Length = 38778
Score = 1621 bits (817), Expect = 0.0
Identities = 818/819 (99%)
Strand = Plus / Minus
Query: 1 atcctatcaagctggaaatgataagtaaggtacattgcgtaaatatgcatcacaacgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31890 atcctatcaagctggaaatgataagtaaggtacattgcgtaaatatgcatcacaacgata 31831
Query: 61 ggaacgagaggggcagagtgtaaacgcagccagtgacctccattggacgttttgctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31830 ggaacgagaggggcagagtgtaaacgcagccagtgacctccattggacgttttgctcttt 31771
Query: 121 tattaattctgtttgttaattgaatggctatcgcagccatgaatcatcaagctggattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31770 tattaattctgtttgttaattgaatggctatcgcagccatgaatcatcaagctggattaa 31711
Query: 181 atgtctccaacacatgctttattttcaatcctttcttagctgagtggttctcggtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31710 atgtctccaacacatgctttattttcaatcctttcttagctgagtggttctcggtgtgtg 31651
Query: 241 taaataggactatattatcgtccatgaaccacatcgttgctttgtttcattgtggtgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31650 taaataggactatattatcgtccatgaaccacatcgttgctttgtttcattgtggtgtac 31591
Query: 301 cgtagcactcttttcacctctgacttcgatccaacacagttttttggcagaggcttcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31590 cgtagcactcttttcacctctgacttcgatccaacacagttttttggcagaggcttcact 31531
Query: 361 gaagttgtcctagacgcaaaatgatcgataagagaatgatgctactggttgaaaaaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31530 gaagttgtcctagacgcaaaatgatcgataagagaatgatgctactggttgaaaaaagat 31471
Query: 421 tcaaattccatgacgagctaagactgttatttgcaggtattgattggaataatctttagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31470 tcaaattccatgacgagctaagactgttatttgcaggtattgattggaataatctttagg 31411
Query: 481 aaaagtttcgtttgatttcttgacggccttgggttttcgcatggaattcccagaagttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31410 aaaagtttcgtttgatttcttgacggccttgggttttcgcatggaattcccagaagttta 31351
Query: 541 cataatccgtatatatatkgggaagagcactgagatggaaattgacatgagtctttatgg 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 31350 cataatccgtatatatatggggaagagcactgagatggaaattgacatgagtctttatgg 31291
Query: 601 ttactttactttactttggtcatgcgagcagcgacgcacttccaacagttctgtgtacag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31290 ttactttactttactttggtcatgcgagcagcgacgcacttccaacagttctgtgtacag 31231
Query: 661 cataacaacttatacagtatgtcttttgttctagtgtccggtgcttccggttatattgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31230 cataacaacttatacagtatgtcttttgttctagtgtccggtgcttccggttatattgcc 31171
Query: 721 cagcacacaattagaattcttttagaaaagggttataaggtcattggtactgtgagaacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31170 cagcacacaattagaattcttttagaaaagggttataaggtcattggtactgtgagaacg 31111
Query: 781 caggagaaagcggattctgttgcacaattgttcaacagt 819
|||||||||||||||||||||||||||||||||||||||
Sbjct: 31110 caggagaaagcggattctgttgcacaattgttcaacagt 31072
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5435
Number of Sequences: 1807
Number of extensions: 5435
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)